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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015952291.1_cds_XP_016492014.1_82269
CDS Infomation

[gene=LOC107811570] [db_xref=GeneID:107811570] [protein=exosome complex component RRP45A-like] [protein_id=XP_016492014.1] [location=complement(join(1688..1902,4131..4189,4502..4641,5021..5110,5842..6030,6135..6199,6242..6390,6487..6582,7001..7210,8392..8528))] [gbkey=CDS]
Sequence

ATGGAGCAAAGATTAGCAAATACATGGCGAATGACAGTGAATGAGAAGAAGTTCATAGAA
TCTGCGTTAGAATCTGAACTGAGAATAGACGGTCGCCGTCCCTTTGATTATCGGAGGCTT
ACAATCAAGTTCGGTAGAGAAGATGGCTCGTCGGAAGTTCAACTGGGGCAAACTCATGTT
ATGGGATTTGTTACGTCGCAACTAGTGCAACCTTATCGAGATCGACCAAACGAAGGAACC
CTTTCAGTATTTACTGAGTTTTCTCCGATGGCTGATCCTTCATTTGAGGCAGGCCGTCCT
TCAGAGTATGCTGTGGAGCTGGGTCGCATAATTGACAGAGGGTTAAGGGAAAGCAGAGCT
GTGGACACTGAATCACTCTGTGTTGTGGCTGGGAAGTGGGTTTGGTCAATTCGTATTGAT
CTCCATATTTTGGACAATGGAGGTAATCTTGTTGATGCTGCCAATGTTGCTGCTTTAGCT
GCTCTTTTGACATTTCGGAGGCCTGAATGTACACTAGGAGGAGATGACAGGCAGGAAGTG
ATACTGCATCCGCCCGAGGTCCCCTTTCTTGCTTATTTCCCTCAATTTTTTTTTAAACCA
ATTCTTCAAAAGAAAATGTTTTTNGTAACTTTTGCATTTATTGGAGACGAGAATTTGGTT
ATAGATCCAACACATCATGAAGAAGCTGTTATGGGAGGAAGAATGTCCGTCACCCTTAAC
ACAAATGGCGAAGTCTGTGCATTTCAAAAGCCTGGAGGACAGGGTACCATGCAAAGTGTT
GTCATGCAGTGTCTACGCATAGCCTCAGTGAAGGCCGGAGATATAACTAGCAAAATTAAA
ACCGCTGTTGAATCTTACAACACAGAGAGAGCTCTCAAAATGGTCAAGCGACATACAAAT
ATTAATGCAGTTGATGTCAATGAACCAGATCAAAAGGCTAAGCAAATCTTGGAGGGGAAA
AAATTAAAATCAGAAGAGTGCAGTGTTAGTCAGAGCGATGACATGGATGTTGAGCAAGGT
AGAGTCAAGAAGAGGAGTGATAAGAACCAGCGTTTCACAGGCGGGCCCTCCAGTTGGGAT
CCATATTCAGAGGGTGTTAACACAGATGAATTGAAAGCTACTCTTGCTTCTCGTGGTTCA
GCAGCAGTGCCTATGAAGCTAGACAATTTAGGTGATGATATTACAGACGAAAGAAAATCA
GATGAACCACTTTCAGATGTTAGTCCAGTATCATCATTGACTGAGTCAGCTGGAAAAGAA
ATGGCAACAAGCAGAGAGAAGACTTTACAAGATGCTGTTAAGCCTAAAAACAGACGGCGA
AAGAAGAAATCGTCTAATTCTGCAGTTTAG

Peptide Sequence

PEP ID

XP_016492014.1
PEP Infomation

PREDICTED: exosome complex component RRP45A-like [Nicotiana tabacum]
Sequence

MEQRLANTWRMTVNEKKFIESALESELRIDGRRPFDYRRLTIKFGREDGSSEVQLGQTHV
MGFVTSQLVQPYRDRPNEGTLSVFTEFSPMADPSFEAGRPSEYAVELGRIIDRGLRESRA
VDTESLCVVAGKWVWSIRIDLHILDNGGNLVDAANVAALAALLTFRRPECTLGGDDRQEV
ILHPPEVPFLAYFPQFFFKPILQKKMFXVTFAFIGDENLVIDPTHHEEAVMGGRMSVTLN
TNGEVCAFQKPGGQGTMQSVVMQCLRIASVKAGDITSKIKTAVESYNTERALKMVKRHTN
INAVDVNEPDQKAKQILEGKKLKSEECSVSQSDDMDVEQGRVKKRSDKNQRFTGGPSSWD
PYSEGVNTDELKATLASRGSAAVPMKLDNLGDDITDERKSDEPLSDVSPVSSLTESAGKE
MATSREKTLQDAVKPKNRRRKKKSSNSAV

Transcript Sequence

Gene sequence data has not been registered.